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Cow Bay FLUXNEXT Release 2026_r1 

Ver: 2026_r1
Status of Data: completed
Update Frequency: annually
Security Classification: unclassified
Record Last Modified: 2026-04-07
Viewed 0 times
Accessed 0 times
Dataset Created: 2026-03-13
Dataset Published: 2026-04-07
Data can be accessed from the following links:
HTTPPoint-of-truth metadata URLOPeNDAP2026_r1 FLUXNET Cow BayHTTPro-crate-metadata.json
How to cite this collection:
Liddell, M. & Weigand, N. (2026). Cow Bay FLUXNEXT Release 2026_r1. Version 2026_r1. Terrestrial Ecosystem Research Network. Dataset. https://dx.doi.org/10.25901/5j6g-mj24 
This release consists of flux tower measurements of the exchange of energy and mass between the surface and the atmospheric boundary-layer using eddy covariance techniques. Data were processed using PyFluxPro as described by Isaac et al. (2017) for the quality control and post-processing steps. The final, gap-filled product containing Net Ecosystem Exchange (NEE) partitioned into Gross Primary Productivity (GPP) and Ecosystem Respiration (ER) has been produced using the ONEFlux software as described in Pastorello et al. (2020). This data set has been produced as part of the FLUXNET Shuttle project.
The Cow Bay flux station is located in lowland tropical rainforest at the Daintree Discovery Centre near Cow Bay in Far North Queensland (GPS coordinates: -16.238189, 145.427150; elevation: 86 m).
The Cow Bay flux station commenced continuous collection of data in December 2008. The flux system is located on an existing tourist tower at the Daintree Discovery Centre at Cow Bay, directly adjacent to Daintree National Park, within the Wet Tropics World Heritage Area.
The site is flanked to the south-west by coastal ranges rising to 400 m and to the east by the Coral Sea. The red clay loam podzolic soils are of metamorphic origin and have good drainage characteristics. The Cow Bay site is gently sloping but the fetch area makes the site one of very complex terrain.
The forest is classed as complex mesophyll vine forest (type 1a) and has an average canopy height of 25 m. The dominant canopy trees belong to the Arecaceae, Euphorbiaceae, Rutaceae, Meliaceae, Myristicaceae and Icacinaceae families. It is continuous for several kilometres around the Cow Bay Tower except for an area 800 m north-east of the tower, which is cleared agricultural land used for a cattle farm. A 1 Ha census plot is located in immediate proximity to the flux tower.
Annual average rainfall at the site is around 3700 mm and is strongly seasonal, with 68% falling between January and April (wet season). Daintree Discovery Centre
The flux station is located at the 23 m level viewing platform on the visitor tower at the Daintree Discovery Centre external link. The visitor centre has seen over 1 million visitors visit since it was set up in 1989 by Pam and Ron Burkett. The DDC is recognised as a leader in ecotourism in the Daintree and has won numerous state, national and international awards including the International Award for Ecotourism (Skal Congree, Budapest 2009). In 2016 the DDC was sold to the Aboriginal Development Benefits Trust (ADBT). The ADBT helps to develop indigenous community, youth and entrepreneurship programs within the Lower Gulf region.
The flux tower is managed by James Cook University. 
Credit
We at TERN acknowledge the Traditional Owners and Custodians throughout Australia, New Zealand and all nations. We honour their profound connections to land, water, biodiversity and culture and pay our respects to their Elders past, present and emerging. 
Purpose
The purpose of the Cow Bay flux station is to : 1) Measure exchanges of carbon dioxide, water vapour and energy between the tropical lowland rainforest in Far North Queensland and the atmosphere using micrometeorological techniques.
2) Quantify the changes in carbon and water balances of an Australian tropical rainforest on a long term basis in the face of climate change.
3) Present the results from the study in real time to the public and inform the public on what these results mean. 
Lineage
Data collected using standard eddy covariance and meteorological instrumentation on a 23m tower at the Coy Bay site. The data were quality controlled using the PyFluxPro software package, see Isaac et al. (2017), which is available at https://github.com/OzFlux/PyFluxPro. Gap filling and partitioning has been done using the ONEFlux software package, see Pastorello et al. 2020, which is available at https://github.com/fluxnet/ONEFlux. 
Method DocumentationPastorello, G., Trotta, C., Canfora, E. et al. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data. Sci Data 7, 225 (2020).Isaac P., Cleverly J., McHugh I., van Gorsel E., Ewenz C. and Beringer, J. (2017). OzFlux data: network integration from collection to curation,PyFluxProONEFlux
Procedure Steps

1. 

Data is measured using standard micro-meteorological instrumentation on a flux tower. 

2. 

Data is recorded on a data logger and is collected by the site PI. 

3. 

Data quality control including removal of data outside plausible ranges, removal of spikes, exclusion of particular date ranges and removal of data based on the dependence of one variable on another is done using PyFluxPro. 

4. 

Filtering for low-ustar conditions, gap filling and partitioning of NEE into GPP and ER are done using ONEFlux. 

Spatial Description
The Coy Bay flux tower is located is located on an existing tourist tower at the Daintree Discovery Centre at Cow Bay, directly adjacent to Daintree National Park, within the Wet Tropics World Heritage Area. 
Temporal Coverage
From 2009-01-01 to 2025-11-27 
Spatial Resolution

Data not provided.

Vertical Extent

Data not provided.

Data Quality Assessment Scope
The data have been quality controlled using the PyFluxPro software. Quality control checks applied to the data include:
  • range checks for plausible limits
  • spike detection and removal
  • dependency on other variables
  • manual rejection of date ranges

Specific checks applied to the sonic and IRGA data including rejection of points based on the sonic and IRGA diagnostic values and on either automatic gain control (AGC) or CO2 and H2O signal strength, depending upon the configuration of the IRGA.

If the data quality is poor, the meteorological data is filled from ERA5 reanalysis data and fluxes are filled using the Marginal Distribution Sampling method. Filled data can be identified by the Quality Controls flags in the dataset.

The ONEFlux software used to gap fill and partition this data set also applies a Median Absolute Deviation (MAD) filter to the carbon dioxide, latent heat and sensible heat before the gap filling step. 
Isaac P., Cleverly J., McHugh I., van Gorsel E., Ewenz C. and Beringer, J. (2017). Oz
Data Quality Assessment Outcome
No anomalous data detected after quality control. 
ANZSRC - FOR
Atmospheric sciences
Carbon sequestration science
Climate change impacts and adaptation
Climatology
Ecosystem function
GCMD Sciences
ATMOSPHERE - AIR TEMPERATURE
ATMOSPHERE - EVAPOTRANSPIRATION
ATMOSPHERE - HUMIDITY
ATMOSPHERE - LATENT HEAT FLUX
ATMOSPHERE - LONGWAVE RADIATION
ATMOSPHERE - RAIN
ATMOSPHERE - SHORTWAVE RADIATION
ATMOSPHERE - VERTICAL WIND VELOCITY/SPEED
ATMOSPHERE - WATER VAPOR PROCESSES
ATMOSPHERE - WIND DIRECTION PROFILES
BIOSPHERE - RESPIRATION RATE
CLIMATE INDICATORS - CARBON FLUX
LAND SURFACE - GROSS PRIMARY PRODUCTION (GPP)
LAND SURFACE - NET ECOSYSTEM CO2 EXCHANGE (NEE)
LAND SURFACE - SENSIBLE HEAT FLUX
LAND SURFACE - SOILS
Horizontal Resolution
250 meters - < 500 meters
Parameters
air temperature
downward heat flux at ground level in soil
ecosystem respiration
gross primary productivity
lateral component of wind speed
longitudinal component of wind speed
magnitude of surface downward stress
mass concentration of water vapor in air
mole fraction of carbon monoxide in dry air
mole fraction of water vapor in air
Monin-Obukhov length
net ecosystem exchange
net ecosystem productivity
net primary productivity of biomass expressed as carbon accumulated in miscellaneous living matter
relative humidity
soil temperature
surface air pressure
surface downwelling longwave flux in air
surface downwelling shortwave flux in air
surface friction velocity
surface net downward radiative flux
surface upward latent heat flux
surface upward mole flux of carbon dioxide
surface upward sensible heat flux
surface upwelling longwave flux in air
surface upwelling shortwave flux in air
thickness of rainfall amount
volume fraction of condensed water in soil
wind from direction
wind speed
Platforms
Cow Bay Flux Station
Temporal Resolution
1 minute - < 1 hour
Topic
climatologyMeteorologyAtmosphere
environment
User Defined
AU-Cow
FLUXNET ID
Author
Liddell, Michael
Co-Author
Weigand, Nico
Contact Point
Liddell, Michael
Publisher
Terrestrial Ecosystem Research Network
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Please cite this dataset as {Author} ({PublicationYear}). {Title}. {Version, as appropriate}. Terrestrial Ecosystem Research Network. Dataset. {Identifier}. 

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