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Revegetation rewilds the soil bacterial microbiome of an old field- Part 2: soil chemistry 

Ver: 2.0
Status of Data: completed
Update Frequency: notPlanned
Security Classification: unclassified
Record Last Modified: 2025-12-02
Viewed 201 times
Accessed 5 times
Dataset Created: 2014-12-17
Dataset Published: 2017-01-13
Data can be accessed from the following links:
HTTPPoint-of-truth metadata URLHTTPMt_Bold_soil_chemistryHTTPSample_sitesHTTPro-crate-metadata.json
How to cite this collection:
Gellie, N., Mills, J., Breed, M. & Lowe, A. (2017). Revegetation rewilds the soil bacterial microbiome of an old field- Part 2: soil chemistry. Version 2.0. Terrestrial Ecosystem Research Network. Dataset. https://dx.doi.org/10.4227/05/587d63e2dd056 
The dataset provides information on soil chemistry from a 10 year chronosequence sample of restoration in southern Australia. The parameters include: A) Physical properties- Soil moisture (%), Gravel (%) - ( >2.0 mm), Soil Texture, i.e.Course Sand (%) (200-2000 µm), Fine Sand (%) - (20-200 µm), Sand (%), Silt (%) (2-20 µm), Clay (%) (<2 µm), and B) Chemical properties- such as, Ammonium Nitrogen (mg/Kg), Nitrate Nitrogen (mg/Kg), Phosphorus Colwell (mg/Kg), Potassium Colwell (mg/Kg), Sulphur (mg/Kg), Organic Carbon (%), Conductivity (dS/m), pH (CaCl2), pH (H2O), DTPA Copper (mg/Kg), DTPA Iron (mg/Kg), DTPA Manganese (mg/Kg), DTPA Zinc (mg/Kg), Exc. Aluminium (meq/100g), Exc. Calcium (meq/100g), Exc. Magnesium (meq/100g), Exc. Potassium (meq/100g), Exc. Sodium (meq/100g) and Boron Hot CaCl2 (mg/Kg). This data would have application for land managers. The soil chemistry data is also related to the eDNA OTU table published on "https://doi.org/10.4227/05/5878480a91885", titled "Revegetation rewilds the soil bacterial microbiome of an old field. Part 1: OTU raw data matrix", and as such it would have an appeal to researchers undertaking a meta-analysis on eDNA and restoration outcomes. 
Credit
We at TERN acknowledge the Traditional Owners and Custodians throughout Australia, New Zealand and all nations. We honour their profound connections to land, water, biodiversity and culture and pay our respects to their Elders past, present and emerging. The authors thank A. Bissett, A. Fitzgerald, A. Young, Z. Baruch, S. Caddy-Retalic, L. Clarke, S. Kennedy, I. Fox, M. Laws, K. McCallum, and J. McDonald for technical and field assistance. We are grateful for technical, field and site access support from the Australian Genome Research Facility, BioPlatforms Australia, SA Water and the Terrestrial Ecosystem Research Network. This work was supported by Australian Research Council funding to AJL and MFB (DE150100542; DP150103414). 
Purpose
This project forms a part of the lead author's PhD project. The information on soil chemistry data was generated for a manuscript published on the Molecular Ecology journal "Revegetation rewilds the soil bacterial microbiome of an old field" that uses eDNA assessment. It provides contextual soil chemistry data in support of the metabarcoding work. 
Lineage
Soil Collection: Three 25 m x 25 m quadrats were randomly selected per site, giving a total of 24 quadrats across the 8 sites. Soil was sampled from the 0-10 cm and 20-30 cm soil horizons at each quadrat. Nine soil samples were pooled into a sterile plastic bag, and homogenised using a sterilised trowel. 300 g soil was sampled from these pooled samples and outsourced or soil physical and chemical analysis. 
Method DocumentationData not provided.
Procedure StepsData not provided.
The study system was an active restoration site at Mt Bold, a water catchment reserve of the Mt Lofty Ranges in South Australia (35.07;S, 138.42 E). This catchment was dominated by an open eucalypt woodland that has historically been subjected to tree clearance and grazing that began early in the 20th century. In this context, the native understory and most of the overstory was cleared and replaced by a grassland dominated by introduced grasses. At the study site, grazing ceased in 2003 when South Australia's water utility (SA Water) took over management. SA Water has actively restored the study site since 2005, with the restoration goal of recreating the local Eucalyptus leucoxylon dominated grassy woodland community.
Temporal Coverage
From 2014-12-17 to 2014-12-18 
Spatial Resolution

Data not provided.

Vertical Extent

Data not provided.

Data Quality Assessment Scope
Data not provided. 
Revegetation rewilds the soil bacterial microbiome of an old field.
Data Quality Assessment Outcome
Data not provided. 
ANZSRC - FOR
Conservation and biodiversity
Ecological applications
Microbiology
Soil chemistry and soil carbon sequestration (excl. carbon sequestration science)
Soil sciences
Terrestrial ecology
GCMD Sciences
AGRICULTURE - SOIL CHEMISTRY
BIOSPHERE - BIODIVERSITY FUNCTIONS
HUMAN DIMENSIONS - REFORESTATION/REVEGETATION
LAND SURFACE - LANDSCAPE ECOLOGY
LAND SURFACE - SOILS
Horizontal Resolution
30 meters - < 100 meters
Parameters
mass fraction of clay in soil
mass fraction of gravel in soil
mass fraction of sand in soil
mass fraction of silt in soil
soil aluminium content
soil boron content
soil calcium content
soil copper content
soil electrical conductivity
soil iron content
soil manganese content
soil mass content of inorganic nitrogen expressed as nitrogen
soil moisture content
soil organic carbon
soil pH
soil phosphorus content
soil potassium content
soil sulfur content
soil texture
soil zinc content
Temporal Resolution
one off
Topic
biota
environment
User Defined
Restoration Ecology
Soil Ecology
Soil Nutrients/Chemistry
Soil pH
Soil Salinity
Soil Texture
Vertical Resolution
< 1 meter
Author
Gellie, Nicholas
Co-Author
Mills, Jacob
Breed, Martin
Lowe, Andy
Contact Point
Gellie, Nicholas
Publisher
Terrestrial Ecosystem Research Network
Export to DCATExport to BibTeXExport to EndNote/Zotero
Terrestrial Ecosystem Research Network
80 Meiers Road, Indooroopilly, Queensland, 4068, Australia.
Contact Us
Creative Commons Attribution 4.0 International Licence
https://creativecommons.org/licenses/by/4.0/
(C)2017 University of Adelaide. Rights owned by University of Adelaide. 
Please cite this dataset as {Author} ({PublicationYear}). {Title}. {Version, as appropriate}. Terrestrial Ecosystem Research Network. Dataset. {Identifier}. 
TERN services are provided on an "as-is" and "as available" basis. Users use any TERN services at their discretion and risk. They will be solely responsible for any damage or loss whatsoever that results from such use including use of any data obtained through TERN and any analysis performed using the TERN infrastructure.
Web links to and from external, third party websites should not be construed as implying any relationships with and/or endorsement of the external site or its content by TERN.

Please advise any work or publications that use this data via the online form at https://www.tern.org.au/research-publications/#reporting 

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